Inspired by Ranker TV's votable lists for The Greatest Cartoon Theme Songs, Best 80's Cartoon Themes and Best 90's Cartoon themes here is my list of my Personal Favorites. Mainly ranging from the 80's and 90's when I was growing up.
http://www.ranker.com/list/my-favorite-cartoon-theme-songs-of-all-time/ryanwitalison,
Animaniacs
Batman: The Animated Series
Chip 'n Dale Rescue Rangers
Star Wars: Clone Wars
TaleSpin
The Real Ghostbusters
The Transformers
ThunderCats
X-Men
Transformers: Prime